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sceleto 0.1.0 documentation
sceleto 0.1.0 documentation

Getting Started

  • Getting Started
  • Markers Tutorial
  • End-to-end gene network tutorial
  • Interactive demos

API Reference

  • sceleto.markers
  • sceleto.network
  • sceleto.annotation
  • Utilities
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sceleto¶

Single-cell RNA-seq analysis toolkit — marker discovery, gene network, and cell type annotation.

Getting Started

  • Getting Started
  • Markers Tutorial
  • End-to-end gene network tutorial
  • Interactive demos

API Reference

  • sceleto.markers
    • Entry Points
    • Results
    • Gene Filter
  • sceleto.network
    • Correlation-based Gene Network
    • Correlation Database
    • Legacy
  • sceleto.annotation
    • Label Transfer
    • pangeapy Integration
  • Utilities
    • Dotplot
    • Annotator
    • UMAP
    • Preprocessing
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Getting Started
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